Multiple alignment program for amino acid or nucleotide sequences

Linux versions

Select either of:

• .rpm
  • mafft-7.526-gcc_fc6.x86_64.rpm (Built on kernel 2.6)
Root privileges are necessary.

% su -
Password: *********
# rpm -Uvh mafft-x.xx-xxx.xxx.rpm
# exit
% rehash (if necessary)

A shell script, mafft, is installed into /usr/bin/ and some binaries are installed into /usr/libexec/mafft/.

License

• .deb
  • mafft_7.526-1_amd64.deb (Built on kernel 2.6)
Root privileges are necessary.

% su -
Password: *********
# dpkg -i mafft_x.xxx-x_amd64.deb
# exit
% rehash (if necessary)

A shell script, mafft, is installed into /usr/bin/ and some binaries are installed into /usr/libexec/mafft/.

License

• .deb (maintained by Debian Med)
• Source
• Portable package (BSD license)
• Conda 

Usage

% mafft input > output