Three versions for Windows.
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Ubuntu version
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Includes text-based interactive mode for basic functions and command-line mode for full functionality.
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Faster than the other two packages for Windows.
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Supports RNA structural alignment (X-INS-i and Q-INS-i).
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Can be called by any Windows program (not yet tested).
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Runs on Windows 10 Version 1709 (updated Oct 2017) and later.
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All-in-one version
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Text-based interactive interface for basic features.
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May be slow, depending on anti-virus software.
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Does not support RNA structural alignment (X-INS-i and Q-INS-i).
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Can be called by any Windows program.
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Cygwin version
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Command-line interface.
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May be slow, depending on anti-virus software.
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Supports RNA structural alignment (X-INS-i and Q-INS-i).
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Requires Cygwin installed.
