Changed the notation of position on the opposite strand in DNA data to cx-cy, where x and y are counted from the 5' end of the strand where the similar region is found (2022/Oct/9).
Fixed a bug in calculating coverage when the reference consists of two or more sequences (2022/Nov/4).
Changed the conditions to concatanate multiple hits (Maximum separation and Maximum overlap in the setting panel below) to use length relative to the reference. (2022/Dec/19).
Fixed a problem when reference sequence is shorter than the "Maximum overlap" parameter (2022/Dec/22).
Full-length sequences from which the specific region above will be extracted: Protein example: a set of full-length genes Nucleotide example: a set of genomic sequences Gaps (-) will be reset, if any, and extra regions will be removed. or upload a plain text file: Clear Zipped file is acceptable.
Allow unusual symbols (Selenocysteine "U", Inosine "i")
Sequence title: Same as input Show position of hits in full-length sequences
Title length in Clustal format (only first word is used as title): (10 – 100)
Job name (optional): (basic Latin alphabet, number and space only)
Notify when finished (optional; recommended when submitting large data): Email address:
Maximum separation: Concatenate multiple hits (not regard them as duplication) if the hits are separated by less than (0 – 10,000) bases/residues.
Maximum overlap: Concatenate multiple hits (not regard them as duplication) if the hits overlap by less than (0 – 100) bases/residues.
