The hardware has been updated, 2016/Jan/5.
The service may be unstable for a while.
If you notice any features that do not work, please send a problem report.
A problem in handling small nucleotide data has been fixed, 2016/Jan/6.
When non-ascii characters appear in sequence titles, no result was returned. This problem has been fixed, 2016/Jan/6.
Fixed a mistake in strategy name (FFT-NS-2, etc) displayed in result page, 2016/Jan/7.
Several problems in tree estimation have been fixed, 2016/Jan/7.
Fixed a problem that FASTA files were displayed as HTML on Internet Explorer, 2016/Jan/12.
Fixed a problem that notification emails were blocked in a few cases, 2016/Jan/18.
Connection was unstable when the network speed was slow. Probably fixed, 2016/Jan/25.
Unstable due to maintenance, Feb/8 (mon), JST.
Multiple sequence alignment and NJ / UPGMA phylogeny
Scoring matrix for amino acid sequences:
Scoring matrix for nucleotide sequences:
↑ Switch it to '1PAM / κ=2' when aligning closely related DNA sequences.
Gap opening penalty:
(1.0 - 3.0)
(0.0 - 1.0)