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the sequence selection below and

  
 removes redundant sequences. help
 increases the number of gap-free sites. help
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   2 gi|365176835|emb|CBY85303.2| HoxA14 homolog [Neoceratodus forsteri]
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   3 gi|220898177|gb|ACL81433.1| HoxA14 [Latimeria menadoensis]
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   5 gi|255742469|gb|ACU32581.1| homeobox protein HoxD14 [Callorhinchus milii]
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   6 gi|262263016|gb|ACY39976.1| HoxD14 [Heterodontus francisci]
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   7 gi|301128894|emb|CBL59356.1| HoxD14 [Scyliorhinus canicula]
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   8 gi|187936707|dbj|BAG32151.1| Hox14 homolog [Lethenteron camtschaticum]
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Archaeopteryx home:
    https://sites.google.com/site/cmzmasek/home/software/archaeopteryx

Archaeopteryx references:
    Zmasek and Eddy (2001)
    Han and Zmasek (2009)