>HOMSA|gi|5729790|ref|NP_006556.1| transcriptional repressor CTCF isoform 1 [Homo sapiens]
-----------------MEGDAVEAIVEESETFIKGKERKTYQRRRE-------------
---------------GGQEEDACHLPQNQTDGGEVV------------------------
-QDVNSSVQ-MVMMEQLDP-TLLQMKTEVME-----------------GTVAP---EAE-
-----------------AAVDDTQIITLQVVN--------------------------ME
EQ----PINIGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKEGLAESEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELP----------------------------PQEDPSWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCAGPD------------------GVEGENGGE--------T----KKSKRGRKRKMRS
KK-EDSSDS-ENA---E-------PDLDD--N------EDEEE--PAV-----EIEPEPE
P--QPV-TPAPPPAKKRRGRPPGR-TNQPK------------QNQPTAIIQVEDQNTGAI
ENIIVEVKKEPD---------------AEPAEGEEEEAQPAAT-----------------
---------DAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>PELSI|ENSPSIP00000003796 pep:novel scaffold:PelSin_1.0:JH205822.1:16124:37080:-1 gene:ENSPSIG00000003593 transcript:ENSPSIT00000003816 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------MEQGDKMEGEAIEAIGEESETFIKGKERKTYQRRRE-------------
---------------GGQEEDACHMPPNQADGAEVV------------------------
-QEVSGGVQ-MVMMEQLDP-TLLQMKTEVME-----------------GTVPQ---EAE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCSGPD------------------GVEGENGGE--------P----KKGKRGRKRKMRS
KK-EDSSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--EPV-APTPPPAKKRRGRPPGK-ANQPK------------QPQPAAIIQVEDQNTGAI
ENIIVEVKKEPD---------------AETV-GEEEEAQPAAV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>ORNAN|ENSOANP00000007536 pep:known supercontig:OANA5:Contig28397:1521:4779:1 gene:ENSOANG00000004762 transcript:ENSOANT00000007538 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------------------------QVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCTGPD------------------GVEGENGGE--------T----KKGKRGRKRKMRS
KK-EDSSDS---------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>gi|171474905|gb|ACB47393.1| CCCTC-binding factor [Pogona vitticeps]
-----------------MEGEVVEAVGEESETFIKGKERKTYQRRRE-------------
---------------GGQEEDACPMPPNQADGSEVV------------------------
-QDVNAGVQ-MVMMEQLDP-TLLQMKTEVME-----------------GTVQQ---EAE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVSV---PVATTSVE----------------------EL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQS
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PTFVPAAFVCSKCGKTFTRRNTMARHA
DNCTGPD------------------GVEGENGGE--------P----KKGKRGRKRKMRS
KK-EDSSDSEENA---E-------PELDN--N------EEEEE--TAI-----EIEAEPE
V--EPV-APVPPPAKKRRGRPPGK-SNQPK------------QTQPTTIIQVEDQNTDAI
ENIIVEVKKEPE---------------AETV-GATAGTQPAAA-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|327281289|ref|XP_003225381.1| PREDICTED: transcriptional repressor CTCF-like [Anolis carolinensis]
-----------------MEGEVVEAIGEESETFIKGKERKTYQRRRE-------------
---------------GGQEEDVCSMPPNQADGTEVV------------------------
-QDVNTGVQ-MVMMEQLDP-TLLQMKTEVME-----------------GAVQQ---EAE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------DL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQA
ELQ----------------------------PQEDPGWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCTGPD------------------GVEGENGGE--------P----KKGKRGRKRKMRS
KK-ENSSDSEENA---E-------PELYDIEE------EDEEE--TAV-----EIEAEPE
IEAEPV-APPPPPAKKRRGRPPGK-ANQPK------------QPQPTAIIQVEDESTGTI
ENIIVEVKKEPE---------------AETV-GVAAGAQPEAV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>MONDO|ENSMODP00000007129 pep:novel chromosome:BROADO5:1:685282646:685300408:1 gene:ENSMODG00000005757 transcript:ENSMODT00000007273 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MEGEAVEAIMEESETFIKGKERKTYQRRRE-------------
---------------GGQDEDACHISQTQADGSEVV------------------------
-QEVNSSVQ-MVMMEQLDP-TLLQMKTEVME-----------------GTVPQ---EAD-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVAKEGLPEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCTGLD------------------GIDGENGGE--------T----KKGKRGRKRKMRS
KK-EESSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--QPV-TPAPPPAKKRRGRPPGK-SSQPK------------QTQPTAIIQVEDQNTGAI
ENIIVEVKKEPD---------------AETVEGEEEEPQSAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>SARHA|ENSSHAP00000004296 pep:novel scaffold:DEVIL7.0:GL834762.1:75014:90492:1 gene:ENSSHAG00000003783 transcript:ENSSHAT00000004340 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MEGEAVEAIMEESETFIKGKERKTYQRRRE-------------
---------------GGQDEDACHISQTQADGSEVV------------------------
-QEVNSSVQ-MVMMEQLDP-TLLQMKTEVME-----------------GTVPQ---EAD-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
HGA-------YENEVSKEGLPEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCTGLD------------------GIDGENGGE--------T----KKGKRGRKRKMRS
KK-EESSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--QPV-TPAPPPAKKRRGRPPGK-ASQPK------------QTQPTAIIQVEDQNTGAI
ENIIVEVKKEPD---------------AEAVEGEEEEPPSAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>MACEU|ENSMEUP00000005228 pep:novel genescaffold:Meug_1.0:GeneScaffold_6565:184:14145:1 gene:ENSMEUG00000005728 transcript:ENSMEUT00000005742 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MEGEAVEAVMEESETFIKGKERKTYQRRRE-------------
---------------GGQDEDACHISQTQADGSEVV------------------------
-QEVNSSVQ-MVMMEQLDP-TLLQMKTEVME-----------------GAVPQ---EAD-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKEGLPEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXX-------XXXXXXX-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFV-AAFVCSKCGKTFTRRNTMARHA
DNCTGLD------------------GIDGENGGE--------T----KKGKRGRKRKMRS
KK-EESSDS-ENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--QPV-TPAPPPAKKRRGRPPGK-ASQPK------------QAQPTAIIQVEDQNTGAI
ENIIVEVKKEPD---------------AEAAEGEEEEPQSAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|396094|emb|CAA80319.1| CTCF protein [Gallus gallus]
-----------------MEGEAVEAIVEESETFIKGKERKTYQRRRE-------------
---------------GGQEDEACHIAPNQADGGEVV------------------------
-QDVNSGVQ-MVMMEHLDP-TLLQMKTEVME-----------------GAVPQ---ETE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKNKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMVMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCSGLD------------------GGEGENGGE--------T----KKGKRGRKRKMRS
KK-EDSSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--SAE-APAPPPSKKRRGRPPGKAATQTK------------QSQPAAIIQVEDQNTGEI
ENIIVEVKKEPD---------------AETVE-EEEEAQPAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|326927215|ref|XP_003209788.1| PREDICTED: transcriptional repressor CTCF-like [Meleagris gallopavo]
-----------------MEGEAVEAIVEESETFIKGKERKTYQRRRE-------------
---------------GGQEDEACHIAPNQADGGEVV------------------------
-QDVNSGVQ-MVMMEQLDP-TLLQMKTEVME-----------------GAVPQ---ETE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKNKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMVMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCSGLD------------------GGEGENGGE--------T----KKGKRGRKRKMRS
KK-EDSSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--EPE-APAPPPSKKRRGRPPGKAATQTK------------QSQPAAIIQVEDQNTGEI
ENIIVEVKKEPD---------------AETVE-EEEEAQPAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>MELGA|ENSMGAP00000001773 pep:novel chromosome:UMD2:13:1721989:1735383:-1 gene:ENSMGAG00000002200 transcript:ENSMGAT00000002439 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MEGEAVEAIVEESETFIKGKERKTYQRRRE-------------
---------------GGQEDEACHIAPNQADGGEVV------------------------
-QDVNSGVQ-MVMMEQLDP-TLLQMKTEVME-----------------GAVPQ---ETE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKNKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKKGLG
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSATVGEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMVMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCSGLD------------------GGEGENGGE--------T----KKGKRGRKRKMRS
KK-EDSSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--EPE-APAPPPSKKRRGRPPGKAATQTK------------QSQPAAIIQVEDQNTGEI
ENIIVEVKKEPD---------------AETVE-EEEEAQPAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>SARHA|ENSSHAP00000004295 pep:novel scaffold:DEVIL7.0:GL834762.1:75014:90492:1 gene:ENSSHAG00000003783 transcript:ENSSHAT00000004339 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MEGEAVEAIMEESETFIKGKERKTYQRRRE-------------
---------------GGQDEDACHISQTQADGSEVV------------------------
-QEVNSSVQ-MVMMEQLDP-TLLQMKTEVME-----------------GTVPQ---EAD-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
HGA-------YENEVSKEGLPEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQGERNGFCIRI------------TVDTIKN
FRVSVSSGAFDRQKQLLDMHFKRYHD-------PNFVPAAFVCSKCGKTFTRRNTMARHA
DNCTGLD------------------GIDGENGGE--------T----KKGKRGRKRKMRS
KK-EESSDSEENA---E-------PDLDD--N------EDEEE--TAV-----EIEAEPE
V--QPV-TPAPPPAKKRRGRPPGK-ASQPK------------QTQPTAIIQVEDQNTGAI
ENIIVEVKKEPD---------------AEAVEGEEEEPPSAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|224063911|ref|XP_002196108.1| PREDICTED: CCCTC-binding factor (zinc finger protein) [Taeniopygia guttata]
-----------------MEGEAVDAIVEESETFIKGKERKTYQRRRE-------------
---------------GGQEDDACHIPPNQADGSEVV------------------------
-QDVSSGVQ-MVMMDQLDP-TLLQMKTEVME-----------------GAVSQ---ETE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQVPVPVTV---PVATTSVE----------------------EL-
QGA-------YENEVSKGGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQG
ELQ----------------------------PQEDPNWQKDP-------DYQP---PAK-
KTKKNKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACR------------------------------
------------------------------------------------------------
------------------------------------------------------------
------PVSWENA---E-------PNLDD--N------EDEEE--TAV-----EIEAEPE
V--EQE-APAPPPSKKRRGRPPGKAAAQPK------------QSQPAAIIQVEDQNTGEI
ENIIVEVKKEPD---------------AETAE-EEEEAQPAVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|34785484|gb|AAH57697.1| Ctcf protein [Xenopus laevis]
-----------------MEGEMAEDIVEDSETFMKRKETKTYQRRRE-------------
---------------GGVDEENCVIVQSQTDICEVP------------------------
-HDVNSNVQ-MVMMEQLDP-TLLQMKTEVME-----------------GMVSQ---EGD-
-----------------PTVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQ--VPVAV---PMATTSVG----------------------EL-
HAA-------FENDVSKEVLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQA
ELQ----------------------------PQEEPGWQKDP-------DYVP---PMK-
KSKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--DVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDTVFHERYAL
IQHQKSHKNEKRFKCDQ-------CEYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PSFVPAAFVCSKCGKTFTRRNTMSRHA
DSCTGPD------------------GTDGENGEE--------GEVIHKKGKRGRKRKMRS
KK-EGSTDSEDNA---E-------PELDD--DDEDEDDDEEEE--TPV-----EIEADPE
P-EEPV-SPIPPPAKKRRGRPPGK-ANQAK--------------QNAAVIQVEDHNTRAI
ENIIVQVKKESD---------------LEAEVVVEAPVLTPAV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|11878220|gb|AAG40852.1|AF305695_1 transcriptional repressor [Xenopus laevis]
-----------------MEGEMAEDIVEDSETFMKRKETKTYQRRRE-------------
---------------GGVDEENCVIVQSQTDICEVP------------------------
-HDVNSNVQ-MVMMEQLDP-TLLQMKTEVME-----------------GMVSQ---EGD-
-----------------PTVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQ--VPVAV---PMATTSVG----------------------EL-
HAA-------FENDVSKEVLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQA
ELQ----------------------------PQEEPGWQKDP-------DYVP---PMK-
KSKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--DVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDTVFHERYAL
IQHQKSHKNEKRFKCDQ-------CEYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PSFVPAAFVCSKCGKTFTRRNTMSRHA
DSCTGPD------------------GTDGENGEE--------GEVIHKKGKRGRKRKMRS
KK-EGSTDSEDNA---E-------PELDD--DDEDEDDDEEEE--TPV-----EIEADPE
P-EEPV-SPIPPPAKKRRGRPPGK-ANQAR--------------QNAAVIQVEDHNTRAI
ENIIVQVKKESD---------------LEAEVVVEAPVLTPAV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>XENTR|ENSXETP00000062683 pep:known scaffold:JGI_4.2:GL172782.1:1468935:1488905:1 gene:ENSXETG00000015615 transcript:ENSXETT00000060905 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MESEMAEAVVEDSETFMKRKETKTYQRRRE-------------
---------------GGVDEDNCVIVQSQTDISEVP------------------------
-HDVNSNVQ-MVMMEQLDP-TLLQMKTEVME-----------------GVVSQ---EGD-
-----------------PTVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQ--VPVAV---PMATTSVG----------------------EL-
HAA-------FENEVSKEGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQA
ELQ----------------------------QQEEPGWQKDP-------DYVP---PIK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--DVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDTVFHERYAL
IQHQKSHKNEKRFKCDQ-------CEYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PSFVPAAFVCSKCGKTFTRRNTMSRHA
DNCTGPD------------------GTDGENGGE--------SEVVHKKGKRGRKRKMRS
KK-EGSSDSDHNN---E-------PFFQD--N------AEPEQ--TPV-----EIEADPE
P-EEPL-TPLPPPAKKRRGRPPGK-ANQAK--------------QNAAVIQVDDHSNRAI
ENIIVQVKKESD---------------LEAEGGVEAAVPTPAV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|170284950|gb|AAI61099.1| ctcf protein [Xenopus (Silurana) tropicalis]
-----------------MESEMAEAVVEDSETFMKRKETKTYQRRRE-------------
---------------GGVDEDNCVIVQSQTDISEVP------------------------
-HDVNSNVQ-MVMMEQLDP-TLLQMKTEVME-----------------GVVSQ---EGD-
-----------------PTVDDTQIITLQVVN--------------------------ME
EQ----PINLGELQLVQ--VPVAV---PMATTSVG----------------------EL-
HAA-------FENEVSKEGLQEGEPMICHTLPLPE------GFQVVKVGANGEVETLEQA
ELQ----------------------------QQEEPGWQKDP-------DYVP---PIK-
KTKKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--DVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDTVFHERYAL
IQHQKSHKNEKRFKCDQ-------CEYACRQ-ERHMIMHKR------------THTGEKP
YACSHCDKTF-RQKQLLDMHFKRYHD-------PSFVPAAFVCSKCGKTFTRRNTMSRHA
DNCTGPD------------------GTDGENGGE--------SEVVHKKGKRGRKRKMRS
KK-EGSSDSEDNA---E-------PELED--DD-DEDEDDEDE--TPV-----EIEADPE
P-EEPL-TPLPPPAKKRRGRPPGK-ANQAK--------------QNAAVIQVDDHSNRAI
ENIIVQVKKESD---------------LEAEGGVEAAVPTPAV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>LATCH|ENSLACP00000011174 pep:novel scaffold:LatCha1:JH126699.1:452823:489575:1 gene:ENSLACG00000009833 transcript:ENSLACT00000011258 gene_biotype:protein_coding transcript_biotype:protein_coding
MQIYCTFLFLRERGREKMENEPSEVILEENETFSKGKERKTYQRRRE-------------
---------------GGQEEDNGAVIQNHPDGIEVVQDLQNQPDGTEEAQDLQNQSDGIE
AQDVNSNVQ-MVMMEQLDP-TLLQMKTEVME-----------------AGVNQ---EGE-
-----------------ATVDDTQIITLQVVN--------------------------ME
EQ----PISLGELQLVQVPVPVSV---PVTATTVG----------------------QL-
QGT-------YENDVSKEGLQ-GEPVICHTLPLPE------GFQVVKVGANGEVETLEQE
ELQPP-------------------------PPQEDPNWAKDP-------EFQP---PAK-
K-KKTKKSKLR----Y-TEE---------------------------GKDVDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMIMHKR------------THTGEKP
YACSHCEKTF-RQKQLLDMHFKRYHD-------PTFVPATFVCTKCGKTFTRRNTMARHA
ENCTGPD------------------SVEGENGGE--------P----KKSKRGRKKKMRS
KR-DDSSGSDENA---E-------PELDD--I------DEEEE--EAVVINDEEMEGGPE
A------LPAPPPAKKKRGRPPGK-SNQAK------------STQTAAIIQVEDQNAGTI
ENIIVEVKKEPD---------------TEEEEGEVEQAQPVVV-----------------
---------EAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>ORENI|ENSONIP00000007230 pep:novel scaffold:Orenil1.0:GL831150.1:2536970:2540553:1 gene:ENSONIG00000005736 transcript:ENSONIT00000007235 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
--------------------------EGGEALTQ--------------------------
-GEVAGNME-MMVMDALDP-TLLQMKTEVLE-----------------GGGT----MTV-
-----------------SGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVD----------------------GL-
QAT-------YVETSAAN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQ----------------------------PQDDPEWTKDP-------DYQPIT-AVR-
KGKKGKKSRLR----Y-AEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCDKTF-RQKQLLDMHFKRYHD-------PSFIPTAFVCDKCSKTFTRRNTMLRHA
DNCTGDA------------------TLE-ENGTP--------PP---KKGRRGRKRKMQS
RR-DDDDDDTVNI---E-------GELDE--------AEEEEDMLTEI-----EVEQAPS
V--VPIPAPVEPPVKRKRGRPPKSKPDSK-------------RIIAAAIIRVEDETTGEV
DDIIV--KKEVG------------ADQDDD---GNEAAQEVVV-----------------
---------APPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|348509710|ref|XP_003442390.1| PREDICTED: transcriptional repressor CTCF-like [Oreochromis niloticus]
-----------------MISCQGNCLNFVSQAICLQGKKARKRAPTLTEADFIGFLKQPR
ICWPIAMEAEVVSMESAQATDGKVLPEGGEALTQ--------------------------
-GEVAGNME-MMVMDALDP-TLLQMKTEVLE-----------------GGGT----MTV-
-----------------SGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVD----------------------GL-
QAT-------YVETSAAN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQAAHEELQGTRVEEEEEDEEPAEVETSVPPQDDPEWTKDP-------DYQPIT-AVR-
KGKKGKKSRLR----Y-AEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCDKTF-RQKQLLDMHFKRYHD-------PSFIPTAFVCDKCSKTFTRRNTMLRHA
DNCTGDA------------------TLE-ENGTP--------PP---KKGRRGRKRKMQS
RR-DDDDDDT------E-------GELDE--------AEEEEDMLTEI-----EVEQAPS
V--VPIPAPVEPPVKRKRGRPPKSKPDSK----------------PAAIIRVEDETTGEV
DDIIV--KKEVG------------ADQDDD---GNEAAQEVVV-----------------
---------APPNGDLTPE------------MILSMMDR---------------------
-------------------------
>ORENI|ENSONIP00000007229 pep:novel scaffold:Orenil1.0:GL831150.1:2536889:2541050:1 gene:ENSONIG00000005736 transcript:ENSONIT00000007234 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------MEAEVVSMESAQATDGKVLPEGGEALTQ--------------------------
-GEVAGNME-MMVMDALDP-TLLQMKTEVLE-----------------GGGT----MTV-
-----------------SGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVD----------------------GL-
QAT-------YVETSAAN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQAAHEELQGTRVEEEEEDEEPAEVETSVPPQDDPEWTKDP-------DYQPIT-AVR-
KGKKGKKSRLR----Y-AEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCDKTF-RQKQLLDMHFKRYHD-------PSFIPTAFVCDKCSKTFTRRNTMLRHA
DNCTGDA------------------TLE-ENGTP--------PP---KKGRRGRKRKMQS
RR-DDDDDDT------E-------GELDE--------AEEEEDMLTEI-----EVEQAPS
V--VPIPAPVEPPVKRKRGRPPKSKPD------------------TAAIIRVEDETTGEV
DDIIV--KKEVG------------ADQDDD---GNEAAQEVVVGEGKSTIQMEELSQGEG
VAQAGQLSEAPPNGDLTPE------------MILSMMDR---------------------
-------------------------
>TAKRU|ENSTRUP00000045998 pep:novel scaffold:FUGU4:scaffold_14:1533474:1536803:-1 gene:ENSTRUG00000017943 transcript:ENSTRUT00000046152 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
--EVTGNME-MMVMDALDP-TLLQMKTEVLD-----------------GGGT----MTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVE----------------------GL-
QAT-------YVDTSTTN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQAA----------------------------EDPDWSKDP-------DYQPIT-TVR-
KGKKGKKSRLR----Y-GEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIEMGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCEKTF-RQKQLLDMHFKRYHD-------PTFVPTAFVCSKCSKTFTRRNTMLRHA
ENCMGDV------------------E-D-ENGTP--------TP---KKGRRGRKRKMQS
RK-DDDDDDDDDT---E-------PDQED--------MDDEDEMLSEI-----EVEQAPP
V--VPIPAPVEPPVKRKRGRPPKNKPAGEF------------QDQPAAIIRVEDEVTGEV
DDIIV--KKEVG------------ADQDDQEICNEEAVEQVVV-----------------
---------APPNGDLTPE------------MILSMMDR---------------------
-------------------------
>TAKRU|ENSTRUP00000045999 pep:novel scaffold:FUGU4:scaffold_14:1533474:1536800:-1 gene:ENSTRUG00000017943 transcript:ENSTRUT00000046153 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
---VTGNME-MMVMDALDP-TLLQMKTEVLD-----------------GGGT----MTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVE----------------------GL-
QAT-------YVDTSTTN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQAAHEELQGTREEEEEEEEEPA--------EEDPDWSKDP-------DYQPIT-TVR-
KGKKGKKSRLR----Y-GEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIEMGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCEKTF-RQKQLLDMHFKRYHD-------PTFVPTAFVCSKCSKTFTRRNTMLRHA
ENCMGDV------------------E-D-ENGTP--------TP---KKGRRGRKRKMQS
RK-DDDDDDDDDTVS-E-------PDQED--------MDDEDEMLSEI-----EVEQAPP
V--VPIPAPVEPPVKRKRGRPPKNKPAVAKIVFFGG------FFPAAAIIRVEDEVTGEV
DDIIV--KKEVG------------ADQDDQEICNEEAVEQVM----------EELAQEEA
AAQEVPLSEAPPNGDLTPE------------MILSMMDR---------------------
-------------------------
>TETNI|ENSTNIP00000012180 pep:novel chromosome:TETRAODON8:5:5277710:5281213:1 gene:ENSTNIG00000009314 transcript:ENSTNIT00000012371 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
--EVAGNME-MMVMDALDP-TLLQMKTEVLD-----------------GGGT----MTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVE----------------------GL-
QAT-------YVDASTTN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQAAHEEL-----------------------QEDPDWSKDP-------DYQPIT-TVR-
KGKKGKKSRLR----Y-GEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIEMGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCEKTF-RQKQLLDMHFKRYHD-------PNFVPTAFVCSKCSKTFTRRNTMLRHA
ENCMGDV------------------E-D-ENGTP--------TP---KKGRRGRKRKMQS
RK-DDDDDDTGS----E-------PEPEE--------MDEEDEMLSEI-----EVEQAPP
V--VPIPAPVEPPVKRKRGRPPKNKPA------------------TAAIIRVEDEATGEV
DDIIV--KKEVG------------ADQDDQEICSEEAVERCSC-----------------
-------LRRRRNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|47230373|emb|CAF99566.1| unnamed protein product [Tetraodon nigroviridis]
------------------------------------------------------------
-------MEDDVVSMETTQADGKVLPEGVDSLIQGS--------------------AIAQ
QAEVAGNME-MMVMDALDP-TLLQMKTEVLD-----------------GGGT----MTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVE----------------------GL-
QAT-------YVDASTTN--KDAEPVICHTLPLPE------GFQVVKVGANGEVETVEQE
ELQAAHEELQGTREEEEEEEEEAADVEPVVSQQEDPDWSKDP-------DYQPIT-TVR-
KGKKGKKSRLR----Y-GEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIEMGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACSQCEKTF-RQKQLLDMHFKRYHD-------PNFVPTAFVCSKCSKTFTRRNTMLRHA
ENCMGDV------------------E-D-ENGTP--------TP---KKGRRGRKRKMQS
RK-DDDDDDT------E-------PEPEE--------MDEEDEMLSEI-----EVEQAPP
V--VPIPAPVEPPVKRKRGRPPKNKPA------------------TAAIIRVEDEATGEV
DDIIV--KKEVG------------ADQDDQEICSEEAVEQVVVGGGKSTIQMEELAQEEV
AGQEVQLSEAPPKRRPNPRDDPQHDGPVMDASVKSVNTRLGFKKNLFLFFFFFFFFFSFS
FGFRLTNACILKRNKHHCCNLRFHF
>GASAC|ENSGACP00000020939 pep:novel group:BROADS1:groupII:11613372:11616719:-1 gene:ENSGACG00000015865 transcript:ENSGACT00000020979 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
-GEVVDDMG-MVVMDALDP-TLLQMKTEVLE-----------------GGGT----VTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-TGAALGLGQLQLVQ------V---PVTRATVE----------------------GL-
QAT-------YVDASTAN--KDADPVICHTLPLPE------GFQVVKVGANGEVETVEQ-
------------------------EVEATVPLEEDPEWSKDP-------DYQPIS-SLRN
KGKKGKKSRLR----Y-GEG---------------------------NRDMDVSVYDFEE
EQQ-------------------------EGMLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYCSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFLEKGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCEQ-------CDYCCRQ-ERHMVMHKR------------THTGEKP
FACSQCDKTF-RQKQLLDMHFKRYHD-------PNFVPTAFVCSKCNKTFTRRNTMLRHT
ENCSGEI------------------E-E-ENGTP--------AP---KKARRGRKRKMQT
RR-DDDDTGSNAK---E-------DELDE--------VEEEEE-LSEL-----EVEQDPP
V--VPIPAPVEPPVKRKRGRPPKNKPNIPKSDLK--------LLTAAAIIRVEDEVTGEV
DDIIV--KKEVG------------VDRDDQEEATDGAVEE-----------------EAV
AAPEV--SEAPPNGDLTPE------------MILSMMDR---------------------
-------------------------
>GASAC|ENSGACP00000020941 pep:novel group:BROADS1:groupII:11613372:11616695:-1 gene:ENSGACG00000015865 transcript:ENSGACT00000020981 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
----------MVVMDALDP-TLLQMKTEVLE-----------------GGGT----VTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-TGAALGLGQLQLVQ------V---PVTRATVE----------------------GL-
QAT-------YVDASTAN--KDADPVICHTLPLPE------GFQVVKVGANGEVETVEQE
EMEADHDELLEVR----------AEVEATVPLEEDPEWSKDP-------DYQPIS-SLRN
KGKKGKKSRLR----Y-GEG---------------------------NRDMDVSVYDFEE
EQQ-------------------------EGMLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYCSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFLEKGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCEQ-------CDYCCRQ-ERHMVMHKR------------THTGEKP
FACSQCDKTF-RQKQLLDMHFKRYHD-------PNFVPTAFVCSKCNKTFTRRNTMLRHT
ENCSGEI------------------E-E-ENGTP--------AP---KKARRGRKRKMQT
RR-DDDDT--------E-------DELDE--------VEEEEE-LSEL-----EVEQDPP
V--VPIPAPVEPPVKRKRGRPPKNKPNIPKSDLK--------LLTAAAIIRVEDEVTGEV
DDIIV--KKEVG------------VDRDDQEEATDGAVEEVVVGEGKSTIQLEELPQEAV
AAPEV--SEAPPNGDLTPE------------MILSMMDR---------------------
-------------------------
>ORYLA|ENSORLP00000011017 pep:known chromosome:MEDAKA1:3:20410268:20415910:-1 gene:ENSORLG00000008771 transcript:ENSORLT00000011018 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------METGQATAL----------------------------------
------------------ASDGKVLSEGGEALIQTG------------------------
QGDEAGTME-MMVMDALDP-ALLQMKTEVLE-----------------GGGT----VTV-
-----------------TGGDEGQIITLQVVN--------------------------ME
EQ-AGAALGLGQLQLVQ------V---PVTTTTVE----------------------GL-
QAT-------YVEASAAN--KDA--VICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQAAQEDLQGQEGEEVEEDEEAAEIVTSV-PQDDPEWTKDP-------DYQPIT-AVR-
KGKKGKKSRLR----Y-AEG---------------------------DRDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYSSVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKYHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKTHKNEKRFKCDQ-------CDYCCRQ-ERHMIMHKR------------THTGEKP
FACEQCEKTF-RQKQLLDMHFKRYHD-------PTFVPTAFVCTKCSKTFTRRNTMLRHA
EGCTGEA------------------SGD-ENGTP--------TP---KKGRRGRKRKMQA
RE-KKPDKVDSDT---E-------GELDE--------IEEEDDLLTEI-----EVEQAAP
V--IPIPAPIEPPVKRKRGRPPKNKPEVCPCFSGIS------NLSVAAIIHVEDEVQ-EV
EELV---KKEVG---------------AEQVNCTDETTEQVITGGGKPGAQSEELSQADA
AAQEVQLSAAPSNGDLTPE------------MILSMMDR---------------------
-------------------------
>ORENI|ENSONIP00000005164 pep:novel scaffold:Orenil1.0:GL831206.1:2751803:2762795:1 gene:ENSONIG00000004097 transcript:ENSONIT00000005168 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MDGRPTDGV---GVVDVPTKEFPSIQAVHSQDAMVADLLQQAA
EAG-------------GHGEGMAAATQSQQQLME------------------------GV
GVEGGTGVE-MMVMDSLDP-TLLQMKTEVIDAAVGGSSAAVGVVGGVPGSAHQ---ATV-
-----------------TTVDQTQIITLQVVN--------------------------ME
EQ---AALGLGELQLVQ------V---PVSATTVE----------------------ALQ
QGN-------FVDTTAMP--KDGDPVICHTLPLPE------GFQVVKVGANGEVETVEQE
EEG-----AETQPDEEEDEEEEPVQ-----PPNDDPNWAKDP-------DYQPPSGVVK-
KIKKGKKSRLR----Y-AEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDM-------CDYCCRQ-ERHMVMHRR------------THTGEKP
YACSQCEKTF-RQKQLLDMHFKRYHD-------PNFIPATFVCPKCNKTFTRRNTMARHA
ENCSGEV------------------E-DAENGAT--------IP---KKGRRGRKRKMRS
RRDDDDDSDEDHA---EQDDDEEEGEGEE--ESSLLQEEEDP---ESM-----ELDQAPA
A--IPVPAPDEPPVKRKRGRPPKNAPK-PPTPSKSVRVATKTTASAAAIIQVEDESTGAV
ENIIV--KKEEGDASAATPLDQGVALTVEGVGLD-EGVETVEL----------------P
VNEET--AAASANGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|348523553|ref|XP_003449288.1| PREDICTED: transcriptional repressor CTCF-like [Oreochromis niloticus]
-----------------MDGRPTDGV---GVVDVPTKEFPSIQAVHSQDAMVADLLQQAA
EAGGVVEGQAGVVVEQGHGEGMAAATQSQQQLME------------------------GV
GVEGGTGVE-MMVMDSLDP-TLLQMKTEVIDAAVGGSSAAVGVVGGVPGSAHQ---ATV-
-----------------TTVDQTQIITLQVVN--------------------------ME
EQ---AALGLGELQLVQ------V---PVSATTVE----------------------ALQ
QGN-------FVDTTAMP--KDGDPVICHTLPLPE------GFQVVKVGANGEVETVEQE
EEG-----AETQPDEEED-EEEPVQ-----PPNDDPNWAKDP-------DYQPPSGVVK-
KIKKGKKSRLR----Y-AEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDM-------CDYCCRQ-ERHMVMHRR------------THTGEKP
YACSQCEKTF-RQKQLLDMHFKRYHD-------PNFIPATFVCPKCNKTFTRRNTMARHA
ENCSGEV------------------E-DAENGAT--------IP---KKGRRGRKRKMRS
RRDDDDDSDEDHA---EQDDDEEEGEGEE--ESSLLQEEEDP---ESM-----ELDQAPA
A--IPVPAPDEPPVKRKRGRPPKNAPK-PPTPSKSVRVATKTTASAAAIIQVEDESTGAV
ENIIV--KKEEGDASAATPLDQGVALTVEGVGLD-EGVETVEL----------------P
VNEET--AAASANGDLTPE------------MILSMMDR---------------------
-------------------------
>ORYLA|ENSORLP00000022986 pep:novel ultracontig:MEDAKA1:ultracontig72:341588:352749:1 gene:ENSORLG00000018357 transcript:ENSORLT00000022987 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
----------------------MVAGQTQQQLMDAG---------------------VGV
AVDGGAGVD-MMVMDSLDP-TLLQMKTEVMDAAVGASSPSAAVVGGVAGAAHQ---ATV-
-----------------TTVDQTQIITLQVVN--------------------------ME
EQ---AALGIGELQLVQ------V---PVSATTVE----------------------ALQ
QGT-------FVDASSIP--KDGDPVICHTLPLPE------GFQVLEDQKG---------
--------FSRSVRAHQHSAGAPMQ-----PPNNDPSWAKDP-------DYQPPSGVVK-
KVKKGKKSRLR----Y-AEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDM-------CDYCCRQ-ERHMVMHRR------------THTGEKP
FGCSQCEKTF-RQKQLLDMHFKRYHD-------PNFVPTAFVCPKCSKTFTRRNTMARHA
ENCSGEV------------------D-DAENGAP--------TP---KKGRRGRKKKMRS
RR-DEDDSDEDQL---E-PDDEDEAEEEE--EASLLLEEDEP---ESL-----ELDQAPA
A--VPVPAPEEPPVKRKRGRPPKNAPK-VPAPSKPVRTPSK-TSSAAAVIQVEDESTGAV
-DIIV--KKEEADGAAEAPLQGGVALAVEDAAMDAEGAETVEL----------------A
DGEET---VAAANGDLTPE------------MILSMMDR---------------------
-------------------------
>GADMO|ENSGMOP00000006796 pep:novel genescaffold:gadMor1:GeneScaffold_4125:40745:45236:1 gene:ENSGMOG00000006386 transcript:ENSGMOT00000006994 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
----------------------MEAVHNQQQLLE--------------------------
--EGGGGVE-MMVMESLDP-ALLQMKTE----------------GGVAGGAHQ---ATV-
-----------------TTVDQTQIITLQVVN--------------------------ME
EQ---AALGLGELQLVQ------V---PVSASTVE----------------------ALQ
QGT-------FVDATAMP--KDGDPVICHTLPLPE------GFQVGKQ------------
------------------------------VQNDDSAWSKDP-------DYQPPSAALK-
KSKKGKKSRLR----Y-AEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNIKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDLGGVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDM-------CDYCCRQ-ERHMVMHRR------------THTGEKP
YACSQCEKTF-RQKQLLDMHFKRYHD-------PNFIPTSFVCPKCSKTFTRRNTMARHA
ENCNGEI------------------D-DAENGTP--------TP---KRGRRGRKRKMRS
RR-DEEEDSEDHA---D--------------PDLLLQEEEEQ---DAM-----ELDQAPA
T--VPVPAPEEPPVKRKRGRPPKNAPKPAPTPTKSPRVAAKAAATAAAIIQVEDESTGAV
ENIIV--KKED-------PRAPGAGLAVEAVGLEAEEVEAVEV----------------Q
GTEDEAGAAAAANGDLTPE------------MILSMMDR---------------------
-------------------------
>GASAC|ENSGACP00000003270 pep:novel group:BROADS1:groupXIX:1433175:1439803:1 gene:ENSGACG00000002504 transcript:ENSGACT00000003281 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
-----------------------MVAAAQHQLMEAA---------------------VGV
GVDGGASVE-MMVMDSLDPIPLLQMKTEVIDSAVGGSSATLGVVGGVAGAAHQ---ATV-
-----------------TTVDQTQIITLQVVN--------------------------ME
EQ---AALGLGELQLVQ------V---PVSATTVE----------------------ALQ
QGT-------FVDTTAMP--KDGDPVICHTLPLPE------GFQVNKQTHS---------
--------QSTFGEERKEPPAALLH-----PQNDDASWAKDP-------DYQPPHGAFK-
KPKKGKKSRLR----Y-GEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDLGGVHLRKQHSFIETGKKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDM-------CDYCCRQ-ERHMVMHRR------------THTGEKP
YACSQCEKTF-RQKQLLDMHFKRYHD-------PNFIPTAFVCPKCSKTFTRRNTMVRHS
ENCNGEV------------------E-DAENGAP--------AP---KKGRRGRKRKMRS
RR-DEEDSEDDNA---E--------FGEE--ETSLLQEEEEEEEPESM-----ELDQAPA
A--IPVPAPDEPPVKRKRGRPPKNAPKPPPTPSRSARVAAKAAASAAALVQLEDESTGAV
ENITV--KKEDSQAPEATPAEQGAAPA-------AEGAETVEL----------------P
VNEDTASAAAAANGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|126632718|emb|CAM56716.1| CCCTC-binding factor (zinc finger protein) [Danio rerio]
-----------------MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAV
IEQ--------------AQAEVEPVVEAQQQLVESV------------------------
-VSVNSSVD-MMMMETLDP-ALLQMKTEVMEAAVGAPVA-------VAGAAHE---ATV-
-----------------TTVDDTQIITLQVVN--------------------------ME
EQ----QLGLGELQLVQVPVSA-V---PVTAATVE----------------------EL-
QGT-------LVDATAMP--KDGEPVICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQ-----PQDDQPPHQEEEEEMAE-----PQNEDPAWSKDP-------DYTP---PVK-
KVKKTKKSKLR----YNTEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHTENVAKFHCPH--CDTVIARKSDL-GVHLRKQHSYIEQGRKCRYCDAVFHERYAL
IQHQKSHKNEKRFKCDQ-------CDYACRQ-ERHMVMHKR------------THTGEKP
YACSQCEKTF-RQKQLLDMHFRRYHD-------PNFVPTSFVCTKCGKTFTRRNTMARHA
ENCTGMD------------------SADGENGTP--------P----KRGRGGRKRKMRS
RK-DDDDDDDSDEHGEP--------------DLDDIDEEDEDDLLDEDQMG--LLDQAPP
S--VPIPAPAEPPIKRKRGRPPKNAPKVSPTKSITK------TTTAAAIIQVEDESTGAI
ENIIV--KKEPE--------------------------GTDAVVAAQPIIEEVEAVEADV
ETVQLTVPEAAPNGDLTPE------------MILSMMDR---------------------
-------------------------
>gi|111306380|gb|AAI21783.1| Ctcf protein [Danio rerio]
-----------------MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAV
IEQ--------------AQAEVEPVVEAQQQLVESV------------------------
-VSVNSSVD-MMMMETLDP-ALLQMKTEVMEAAVGAPVA-------VAGAAHE---ATV-
-----------------TTVDDTQIITLQVVN--------------------------ME
EQ----QLGLGELQLVQVPVSA-V---PVTAATVE----------------------EL-
QGT-------LVDATAMP--KDGEPVICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQ-----PQDDQPPHQEEEEEMAE-----PQNEDPAWSKDP-------DYTP---PVK-
KVKKTKKSKLR----YNTEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKKKKK---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>gi|120538162|gb|AAI29308.1| Ctcf protein [Danio rerio]
-----------------MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAV
IEQ--------------AQAEVEPVVEAQQQLVESV------------------------
-VSVNSSVD-MMMMETLDP-ALLQMKTEVMEAAVGAPVA-------VAGAAHE---ATV-
-----------------TTVDDTQIITLQVVN--------------------------ME
EQ----QLGLGELQLVQVPVSA-V---PVTAATVE----------------------EL-
QGT-------LVDATAMP--KDGEPVICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQ-----PQDDQPPHQEEEEEMAE-----PQNEDPAWSKDP-------DYTP---PVK-
KVKKTKKSKLR----YNTEG---------------------------DKDMDVSVYNFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKKKKK---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>gi|66911889|gb|AAH97009.1| Ctcf protein, partial [Danio rerio]
-----------------MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAV
IEQ--------------AQAEVEPVVEAQQQLVESV------------------------
-VSVNSSVD-MMMMETLDP-ALLQMKTEVMEAAVGAPVA-------VAGAAHE---ATV-
-----------------TTVDDTQIITLQVVN--------------------------ME
EQ----QLGLGELQLVQVPVSA-V---PVTAATVE----------------------EL-
QGT-------LVDATAMP--KDGEPVICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQ-----PQDDRPPHQEEEEEMAE-----PQNEDPAWSKDP-------DYTP---PVK-
KVKKTKKSKLR----YNTEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKKKKK---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>gi|53734069|gb|AAH83236.1| Ctcf protein, partial [Danio rerio]
-----------------MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAV
IEQ--------------AQAEVEPVVEAQQQLVESV------------------------
-VSVNSSVD-MMMMETLDP-ALLQMKTEVMEAAVGAPVA-------VAGAAHE---ATV-
-----------------TTVDDTQIITLQVVN--------------------------ME
EQ----QLGLGELQLVQVPVSA-V---PVTAATVE----------------------EL-
QGT-------LVDATAMP--KDGEPVICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQ-----PQDDQPPHQEEEEEMAE-----PQNEDPAWSKDP-------DYTP---PVK-
KVKKTKKSKLR----YNTEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVRWCRE
CIAVQ-------------------------------------------------------
--------LIKKYCPK--------------------------------------------
------------------------------------------------------------
-----------KKKK---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>DANRE|ENSDARP00000059912 pep:known chromosome:Zv9:18:22066704:22074092:1 gene:ENSDARG00000056621 transcript:ENSDART00000059913 gene_biotype:protein_coding transcript_biotype:protein_coding
-----------------MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAV
IEQ--------------AQAEVEPVVEAQQQLVESV------------------------
-VSVNSSVD-MMMMETLDP-ALLQMKTEVMEAAVGAPVA-------VAGAAHE---ATV-
-----------------TTVDDTQIITLQVVN--------------------------ME
EQ----QLGLGELQLVQVPVSA-V---PVTAATVE----------------------EL-
QGT-------LVDATAMP--KDGEPVICHTLPLPE------GFQVVKVGANGEVETVEQD
ELQ-----PQDDQPPHQEEEEEMAE-----PQNEDPAWSKDP-------DYTP---PVK-
KVKKTKKSKLR----YNTEG---------------------------DKDMDVSVYDFEE
EQQ-------------------------EGLLS--EVNAEKVVGNMKPPKPTKIKKK--G
--------V-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HKCHLCGRAFRTVTLLR
NHLNTHTGTRPHKCT--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVRWCRE
CIAVQ-------------------------------------------------------
--------LIK-YCP---------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>SARHA|ENSSHAP00000015681 pep:novel scaffold:DEVIL7.0:GL834666.1:1222728:1242523:1 gene:ENSSHAG00000013360 transcript:ENSSHAT00000015809 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
---------------------------RMGTEASASPEQFTKIKGTDVIQEKA-KENDVD
KVSKLKERQ-SSCGLEVDC-SYGVLQAKIVE-------------------GELELA-PS-
-----------------NEENEKHILTLQTVH--------------------------FA
TD-ETDHQEMSQLTVQP---AEGM---HVMVQQGE----------------------SGL
QSL-------LVLQQDIN-----VQAELNEIPHQN------LHQCVAISIQEEVFSLHEM
EVMEINVVEESVEVSSEEDKLTVNS-----PLDENTELIK----------------LCEE
REFTDQKEEIF----T-FEKLREGEK---------------------EEIILLPANSEIE
EHE-------------------------DVHSS--EQDIDEVSGTAK----NQAKSK--G
--------M-KRTFHCEICIFTSSRISSFNRHMKTHSDEKP--HMCHLCLKAFRTVTLLR
NHVNTHTGTRPYKCS--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKR
HIRSHTGERPFHCCLCSYASKDTYKLKRHMRTHS---GEKPYECYVCHARFTQSGTMKIH
ILQKHSENVPKHQCPH--CSTVIARKSDL-RVHLRNLHSYKATEMKCRYCPAVFHERYAL
IQHQKTHRNEKRFKCDD-------CNYACKQ-ERHMTVHKR------------THTGEKP
FTCLSCNKCF-RQKQLLNVHFKKYHD-------KNFIPTVYECPKCGKGFSRWNNMRKHS
EHCEAVK------------------GKSI-------------PS---AKGRKNKKKKQKD
PK-QDAKEEGRQT---------------RNFRSDKVVEQMPIEDTSIVNIEHHPNEIVPV
VYGMAA-DV-EE------------------------------------------------
------------------------------------------------------------
-----------PKTEVTCE------------MILNMMDK---------------------
-------------------------
>SARHA|ENSSHAP00000015680 pep:novel scaffold:DEVIL7.0:GL834666.1:1220619:1244690:1 gene:ENSSHAG00000013360 transcript:ENSSHAT00000015808 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
--------------MEILK-SY--------------------------------------
---------------------RRQI-----------------------------------
RD-ETDHQEMSQLTVQP---AEGM---HVMVQQGE----------------------SGL
QSL-------LVLQQDIN-----VQAELNEIPHQN------LHQCVAISIQEEVFSLHEM
EVMEINVVEESVEVSSEEDKLTVNS-----PLDENTELIKDKDKGIYGAEEGEVQQLCEE
REFTDQKEEIF----T-FEKLREGEK---------------------EEIILLPANSEIE
EHE-------------------------DVHSS--EQDIDEVSGTAK----NQAKSK--G
--------M-KRTFHCEICIFTSSRISSFNRHMKTHSDEKP--HMCHLCLKAFRTVTLLR
NHVNTHTGTRPYKCS--DCDMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKR
HIRSHTGERPFHCCLCSYASKDTYKLKRHMRTHS---GEKPYECYVCHARFTQSGTMKIH
ILQKHSENVPKHQCPH--CSTVIARKSDL-RVHLRNLHSYKATEMKCRYCPAVFHERYAL
IQHQKTHRNEKRFKCDD-------CNYACKQ-ERHMTVHKR------------THTGEKP
FTCLSCNKCF-RQKQLLNVHFKKYHD-------KNFIPTVYECPKCGKGFSRWNNMRKHS
EHCEAVK------------------GKSI-------------PS---AKGRKNKKKKQKD
PK-QDAKEE--------------------------VVEQMPIEDTSIVNIEHHPNEIVPV
VYGMAA-DV-EE------------------------------------------------
------------------------------------------------------------
-----------PKTEVTCE------------MILNMMDK---------------------
-------------------------
>MONDO|ENSMODP00000020611 pep:novel chromosome:BROADO5:1:486248077:486266900:1 gene:ENSMODG00000016490 transcript:ENSMODT00000020976 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
---------------------------RMGTEASASPEHFTKIKGTDLIQEKA-KESDVD
KVSRLKERQ-SSCGLEVDC-SYGVLQAKIVE-------------------GELELT-PQ-
-----------------TQENEKHILTLQTVH--------------------------FA
TD-EMDHQEM---TVEP---AEGM---HVMVQQGE----------------------SGL
QSL-------L----------------LNEIPHQN------LHHCVAISIQEEVFSLHEL
EVMEINVVEESVEISSEEDKLTVNP-----PLDENTESVKVE-------KNYEVPQLCEE
REITDQKEGLF----T-FDKLREGEK---------------------EEIILLPANSEIE
EHE-------------------------DIPSS--EQDTDEVSGTAK----NQAKTK--D
--------V-KQTFHCEICIFTSSKISCFNRHMKTHSDEKP--HMCHLCLKAFRTVTLLR
NHVNTHTGTRPYKCS--DCDMAFVTSGELVRHRRYKHTHEKPFKCTMCKYASVEASKLKR
HIRSHTGERPFHCCLCNYASKDTYKLKRHMRTHS---GEKPYECYVCHARFTQSGTMKIH
ILQKHSENVPKHQCPH--CATVIARKSDL-RVHLRNLHSYKAAEMKCRYCTDVFHERYAL
IQHQKTHRNEKRFKCDD-------CSYACKQ-ERHMRVHKR------------THTGEKP
FTCLSCNKCF-RQKQLLNVHFKKYHD-------KNFIPTVYECPKCGKGFSRWNNMRKHS
ELCEVIR------------------GKAV-------------QS---AKGRKTKKKKQKG
PK-QDVKEEGK-------------------------FEQMPIEDISNVNIERHTNEIVPV
GYGIAT-DVAEE------------------------------------------------
------------------------------------------------------------
-----------QKTEVTCE------------MILNMMDK---------------------
-------------------------
>ORNAN|ENSOANP00000025255 pep:known ultracontig:OANA5:Ultra516:6791142:6804936:-1 gene:ENSOANG00000009260 transcript:ENSOANT00000029059 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------SCQDWYKSHL----KAYFIS--G
--------V-NKTFHCDICKFTTSRQSSLNRHLKIHSDVKP--HVCHLCLKAFRSATLLR
NHVNTHTGTKPYKCG--DCTMAFVTSGELVRHRRYKHTHEKPFQCTICKYASVEASKLKR
HIRSHTGERPFRCRLCSYASRDTYKLKRHMRTHS---GEKPYECSVCQTKFTQRGTMKIH
MLQKHTENAPKHQCPH--CGTMIARKSDL-RVHLKNLHSYKTTEIKCHYCSAAFHERYLL
LQHQKTHRDEKRFKCGD-------CDYACKQ-ERHMIVHKR------------THTGEKP
FSCLHCNKRF-RQKRLLSVHFRKYHD-------ENFTPIVYECPKCGKAFSRLWILYERS
-HFRYVE------------------WNSIFLCCRCARLFQCPSV---CNLRRTKRS----
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>ORNAN|ENSOANP00000014738 pep:known ultracontig:OANA5:Ultra516:6791279:6804666:-1 gene:ENSOANG00000009260 transcript:ENSOANT00000014741 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------KIHSDVKP--HVCHLCLKAFRSATLLR
NHVNTHTGTKPYKCG--DCTMAFVTSGELVRHRRYKHTHEKPFQCTICKYASVEASKLKR
HIRSHTGERPFRCRLCSYASRDTYKLKRHMRTHS---GEKPYECSVCQTKFTQRGTMKIH
MLQKHTENAPKHQCPH--CGTMIARKSDL-H-----------------------------
-EHQKTHRDEKRFKCGD-------CDYACKQ-ERHMIVHKR------------THTGEKP
FSCLHCNKRF-RQKRLLSVHFRKYHD-------ENFTPIVYECPKCGKAFSR--------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>HOMSA|gi|29570785|ref|NP_542185.2| transcriptional repressor CTCFL [Homo sapiens]
------------------------------------------------------------
---------------------------MAATEISVLSEQFTKIKELELMPEKGLKEEEKD
GVCREKDHR-SPSELEAER-TSGAFQDSVLE-------------------EEVELVLAP-
-----------------SEESEKYILTLQTVH--------------------------FT
SE-AVELQDMSLLSIQQ---QEGV---QVVVQQPG----------------------PGL
-------------------------LWLEEGPRQS------LQQCVAISIQQELYSPQEM
EVLQFHALEENVMVASEDSKLAVS-------LAETTGLIKLE-------EEQEKNQLLAE
R----TKEQLF----F-VETMSGDERS--------------------DEIVLTVSNSNVE
EQE-------------------------DQPTA--GQADAEKAKSTK----NQRKTK--G
--------A-KGTFHCDVCMFTSSRMSSFNRHMKTHTSEKP--HLCHLCLKTFRTVTLLR
NHVNTHTGTRPYKCN--DCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKR
HVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHS---GEKPYECHICHTRFTQSGTMKIH
ILQKHGENVPKYQCPH--CATIIARKSDL-RVHMRNLHAYSAAELKCRYCSAVFHERYAL
IQHQKTHKNEKRFKCKH-------CSYACKQ-ERHMTAHIR------------THTGEKP
FTCLSCNKCF-RQKQLLNAHFRKYHD-------ANFIPTVYKCSKCGKGFSRWINLHRHS
EKCGSGE------------------AKSA-------------AS---GKGRRTRKRKQTI
LK-EATKGQKEAA---------------KGWKEAANGDEAAAEEASTTKGEQFPGEMFPV
ACRETTARVKEE------------------------------------------------
------------------------------------------------------------
-----------VDEGVTCE------------MLLNTMDK---------------------
-------------------------
>PELSI|ENSPSIP00000012493 pep:novel scaffold:PelSin_1.0:JH209331.1:1517019:1535688:1 gene:ENSPSIG00000011195 transcript:ENSPSIT00000012554 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
---------------------------MMAAQDSHLPEPFTKIKGAERIWDRAREDDGGD
RLPWVKERN-SICDPDVEV-LNGAPPAKALE-----------------GGRNLELS-PS-
-----------------LIQSEKHLIMLQTVR--------------------------LK
EG-EEDLQAVSQLNIQQ---QSGL---HMVVQRGA----------------------SVL
QPL-------VVVQQGV-------------GAQQN------IPTGVAISLQDGVYTFHDM
EVMQINVLQEKVQAKDEENKS----------MDKSPGMLLIK---------KLVPKNLKN
SVKIDRTKDLH----A-VEEILSCTA---------------------KDDISVSLNEPKE
QGE---------------------------QSV--VKKTDTLEAHTN----TQHRKK--G
--------E-KVTIHCDLCAFTSLRMSSLNRHMKTHSDEKP--HLCHLCLKAFRTVTLLR
NHVNTHTGTRPYKCS--DCEMAFVTSGELARHRRYKHTLEKPFKCSVCKYSSVEASKLKR
HIRSHTGERPYNCCLCSYASKDTYKLKRHMVTHS---GEKPYECYVCQARFTQSGTMKIH
ILQKHSENVPRYQCPH--CNAFIARKSDL-GVHLRNLHSYLAVAMKCSYCEAVFHERYAL
IQHKKTHRNEKRFKCDR-------CSYACKQ-ERHLIVHKR------------THTGEKP
FTCVSCSKCF-RQKQLLTVHFRKHHD-------SNFKPTVYECPKCGKGYSRWNNMHKHA
ENCGLAR------------------AKVV-------------TR---HKGSKGKKKRWNS
LK-QDVKQEGCSE-----------VSCGGLWESAGTVDLGSFQDVSVVNTECCASEIVPV
EYGIET-STPRE------------------------------------------------
------------------------------------------------------------
-----------QKTEMTCE------------MILNMMDK---------------------
-------------------------
>TAEGU|ENSTGUP00000008541 pep:novel chromosome:taeGut3.2.4:20:12851742:12856852:1 gene:ENSTGUG00000008275 transcript:ENSTGUT00000008632 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------FTSAKLSSRRCHLRSHSDEKR--HTCHLCPKAFHTAALLH
NHVNAHTGNKPHKCS--ECDAAFVTRGELSRHRRYKHTLEKPFKCTICEYSSVEASKMRR
HVRSHTGERPYPCHLCSYASKDAYQLKRHMLTHT---GEKRYECYICQARFTQSGTMKIH
VLQKHGENVPKHQCPH--CSTFLSRKRDL-GVHLRNLHSYMEEAVKCRDCGAAFHERYAF
LQHRRTHRSEERFRCAQ-------CSCTCNQ-----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>gi|171474913|gb|ACB47397.1| brother of regulator of imprinted sites [Pogona vitticeps]
------------------------------------------------------------
------------------------------------------------------------
----------------------------------------------------------A-
-----------------LGEGEKHLVLLKTVH--------------------------LK
IE-ENDAQGPSVAN-QH---DGVL---HAVMQRER----------------------CIL
EPL-------EVMTQSI-------------GIRNN------LEEVVAVGLPEGIYTVQEM
EVMHINCLKE-MQAFNEDEKS----------TRKTLDALRIE-----------RDRSIDV
ATDGDKGQPLL----V-AEEDRISPF-------------------------------CLA
EAA-------------------------KNLSS--RSKEDPVSFHNS----EKKDQS--N
--------EGDVPQHCPFCTFTCFSIAGLRRHMKKHSEERP--HMCHLCLKAFRTVSLLR
NHVNTHTGTKPHKCG--ECDMAFVTSGELSRHRRYKHTLEKPFKCTFCSYCSVEASKLKR
HIRSHTGERPYHCTLCSYASRDTYKLKRHMVTHS---GEKPFECLICKARFTQAGTLKFH
ILHKHETNVPKHQCPH--CQTSVARKGDL-SIHLRNLHSYIEVPLRCNYCDAAFHERYAF
RQHKKTHRNEKRFKCDQ-------CNYACKQ-ERHMVIHKW------------THTGEKP
FVCVACSKCF-RQKQLLRVHFKKHHD-------SSFKPKVYECSKCSKEYSRWSNMHKHA
EKCEDRR------------------AI---------------QP---SKGSKGKKKADKR
SS-HNRQREGSN------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>ANOCA|ENSACAP00000016003 pep:novel scaffold:AnoCar2.0:GL343217.1:1034665:1047855:1 gene:ENSACAG00000016243 transcript:ENSACAT00000016323 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------HCRFCTYTSSSVTGLNRHMKRHSDKNP--HMCHLCLKVCRTVALLR
NHMNTHTGTKPYKCS--ECDMAFVTGGELSRHRRYKHTHEKPFKCTFCNYSSVEASKLKR
HIRSHTGERPYNCTLCSYASRDTYKLKRHMLIHS---GEKPFECLICKARFTQAGTLKFH
KLHKHGTNVPKYQCPH--CNTAVARKGDL-RIHLQNLHSYIKVPLKCNFCEDAFHERHAF
KQHKKTHINEKKFKCDQ-------CNYACKQ-GRHMVMHKR------------THTGEKP
FVCISCSKCF-RQKQLLTIHAKKYHD-------SSFQPKVFECPQCGKEYSRWNNMRKHA
ANCKGKS------------------VV---------------QP---SKGSKKRKKEEKR
S-----------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>MELGA|ENSMGAP00000009338 pep:novel chromosome:UMD2:22:12488611:12494479:1 gene:ENSMGAG00000009067 transcript:ENSMGAT00000010157 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------FSCELCTYTSLKISSLNRHRKIHSKEKC--HVCHICLKAFRTAALLQ
NHLNVHTGTRPYKCS--DCDMAFVTSGELARHRRYKHTFEKPFKCSVCKYSSVEASKLKR
HVRSHTGERPYACYLCTYAGKDAYKLKRHMATHS---GEKPHECYICHTKFAQSG-----
-------------------------------VHLQNVHSHMAVAGQCSHCEAAFHNHYAL
TQHKKIHRDGRSFECDQ-------CSSACKQ-ECHLIVHKR------------THSGEKS
FTCSCCSKTF-QQKQLFTVHSKKHCD-------SSV------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>SARHA|ENSSHAP00000001830 pep:novel scaffold:DEVIL7.0:GL867782.1:14413:31463:1 gene:ENSSHAG00000001630 transcript:ENSSHAT00000001851 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------EEGELDWH-PS-
-----------------NEENERHLLALQMLP--------------------------FT
TD-ETG-QEMSQLAVQP---AEGM---HIMEPQGE----------------------SGL
QSL-------LGWQQYIN-----VQPELNEMPHQD------LSRCVELNIPEEIFSLEEM
EMIENYIRDESADFFNED-KWIFDF-----PFDE--ELLKDQDKGIYG-AEWEAQELCEE
REYTDPKEEIV----N-FETPRDGEK---------------------EEIILLLANSEIE
EHE-------------------------DIHSP--PQDLDEVSQTAA----NQAETK--G
--------T-KWTFHCEICKFTSSKMSSLTRHMKTHTAEKP--HMCHLCPKAFRTGTLLR
NHLNTHTGTRPYKCS--DCEMAFVTSGELGRHRRYKHTHEKRFKCSMCNYASVEASKLKR
HIRSHTGERPFPCSFCNYASKDIFKLKRHMTSHS---GEKPYECSFCSARFSQSGTLKIH
VLQKHSGNAPKHQCPH--CATLITRKSDL-RVHLRNLHSYSAAEMKCRYCTAAFHERYAL
IQHQKTHRDEKRFKCDV-------CSYACKQ-AQHMTIHKR------------IHTGEKP
FTCLSCNKSF-RQKQLLKVHFKKYHD-------ETSVPPVHECPKCGKGFSRLNNMRKHS
EHCEVVR------------------GKAV-------------PS---A-----KEKDQKG
PE-QGAREEVLIG-----------FQTAQGLRNYKVIEEMPIEDISIVNIENATVEMVPV
VYGTTS--DVQE------------------------------------------------
------------------------------------------------------------
-----------PQTEITFE------------MILNMIEK---------------------
-------------------------
>PETMA|ENSPMAP00000004689 pep:putative scaffold:Pmarinus_7.0:GL483954:4616:13063:1 gene:ENSPMAG00000004257 transcript:ENSPMAT00000004708 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------EDTHIITLHPVS--------------------------LE
ETGEGGGTSIGEITLVQVQADLTV---IIHNVKL-----------------------QLN
SVL-------KIDVRRTL--LQGVP-ITHTLPLPE------GVQVVKVGPNGELE-VERA
PMG----------------------------SQDERSKEKDP-------DYQL---PVKK
PVRKGRKNKLR----Y-KQE---------------------------AADADISVYDFEE
QEE-------------------------GRLVSSQDVGVEKAIAP-KPPKPTRIKKK--G
--------A-KKTFQCELCSYTCPRRSNLDRHMKSHTDERP--HCCHLCDRAFRTVTLLR
NHVNTHTGTKPHKCM--ECDMAFVTSGELVRHRRYRHTHEKPFKCSMCDYASVEVSKLKR
HIRSHTGERPFQCGLCSYASRDTYKLKRHMRTHS---GEKPYECHVCHARFTQSGTMKMH
VLQKHTDNVPKYHCPH--CDAVIARKSDL-GVHLRKQHAVLERELRCRYCRAIFHERYAL
MQHQRTHRNEKRFKCDQ-------CEYACKQ-ERHMIMHKR------------VHTGEKP
FECTLCDKTF-RQKQLLDFHFKRYHD-------PSFVPTTYECSKCHRNFTRRSTMMKHF
DMCDGEL------------------ESGEQNGK---------AR---RGRRRGRKRKMQS
RK-HGSSSESDEMPTDE---------------------DEEEEELNEE-----SVEVADE
E----VEEPEPPPMKRRRGRPPKAKPGRPA------KKVAGSDSVACGIIEIIPVTVGGP
DGPDDDEEEE--------------EEEEEAAEGEEGAVETAADEG---------------
-----------PKNDITPE------------MILSMMDQ---------------------
-------------------------
>BRAFL|gi|260819198|ref|XP_002604924.1| hypothetical protein BRAFLDRAFT_217118 [Branchiostoma floridae]
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------MR-------------------------------------------------
------------------------------------------------------------
--------VGGKTYQCYKCDYTCQRMAFLERHMKVHTDERP--FKCGTCEREFRTMQSLQ
NHINSHNGVKPHKCD--QCPMSFVTSGELMRHRRYKHTHEKPHKCTMCDYASVEISKLKR
HMRSHTGERPFQCGMCSYASPDSYKLKRHMRTHT---GEKPYECSVCLATFTQSGSLKMH
-MQRHLGTAPSYVCDI--CGTALTRKSDL-KSHVRKLHTGDKL-LTCKYCDSAFPDKYNL
TKHLKTHQGEKRFRCED-------CNYCCTQ-ERHLINHKR------------CHTGEKP
FVCVQCDHTF-RQEQLLKQHIKVHHT-------PGYTPPRYACTNCDKSFTRKGNLR---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>MACEU|ENSMEUP00000007622 pep:novel genescaffold:Meug_1.0:GeneScaffold_3588:549:7519:-1 gene:ENSMEUG00000008337 transcript:ENSMEUT00000008359 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
------------------------------TEASALAEQFTKRKGPDLIQEKDAESDGGL
SSRRGSGRG-LEVGC-----PYGVLQAKLVE---------------------GELQLVP-
-----------------SQEGEKHVLTLQTVH--------------------------LA
PE------ERGRVAVPP---AEGM---HVVVQPAE----------------------GGF
PAV-------LVLQQDLS-----------VLARPS------VRRCVAISLQEELFSLHEM
ELVEIDVVEDSTDVSCEDRKLE---------------------------KQGMNQPLSEE
RELPDQREHLF----T-FEALGEGEE---------------------EEIILLPASSEME
ERE-------------------------DVPAS--EQDLDEGSETAE----TQAEST--X
--------X-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKLKR
HMRSHTGERPFHCCLCSYASKDTYKLKRHMRTHS---GEKPYECYICHARFTQSGTMKMH
ILQKHSENVPKHQCPH--CATVIARKSDL-RVHLRNLHSYKATEMKCRYC-AVFHERYAL
IQHQKTHRNEKRFKCDD-------CSYACKQ-----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>OIKDI|GSOIDT00001753001
------------------------------------------------------------
------------------------------------------------------------
---MSQQYEEEPIMEE--------------------------------------------
--------------------EDGNTTTVQFIA--------------------------VA
PEEHERMVREGELPETIQGADVQM---TIGGTESRPVRLIAVDSNGIPVTDPTILQAAAE
QAG-------IMFVSKDENDHENQISIDEAMQLRN---------------EENQQVPGYQ
DQ----------------------------PPADPYDYQAEP-----------------E
YHDSEKGVPLR----NYTSQDVVYEEAPENG----------------GIKQQENIYDYQD
VPIQN-----------------------EPKIDNHYKKSQSNTQRTKYPGTIQVGAN--G
--------EKRKVYQCSECAFYSHRHSNLIRHMKIHTDERP--YKCHLCARAFRTNTLLR
NHINTHLGVKPYKCPEANCEMAFVTSGELTRHRRYKHTHEKPFKCTLCEYASVEISKLRR
HFRSHTGERPFSCDICGKAFADSFHLKRHKFSHT---GEKPYECPHCKARFTQHGSLKMH
VMQQHTKTAPKFECEREICHTMLGRKSDL-NVHLRKQHSYQEIPMQCRYCEEVFHDRWSL
MQHQKTHRS-GRYRIDEDGNQIFDPDYDSEM-EDMEGGHGSGNLVYTEDGHVIGQDGSPN
VIVQRVQHIDGQQGVPIEDHQQMQHDEHNMHAVEHQMDHSQEAPPIHQGHHRQAHAEAKS
ERFEQEQQHDPFAFDDDQNMGNGEYMHAPQMGQTMAQPVE--------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>CIOIN|ENSCINP00000013892 pep:known scaffold:KH:HT000097.1:44901:51453:1 gene:ENSCING00000006765 transcript:ENSCINT00000013892 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
----------------------------MADDGKDSVEVTSQIESVNGTVAPPNDSIEPE
ENEVSEKNE-EKIIEEVSNEAPAEAPV---------------------------------
--------------------EDGTTTTVQFIA--------------------------VS
ADEHARMVTAGELPESVHGADVHM---QIPGAEAQQVRLIAVDSNGVPVTESAILQAAAE
QAG-------IVFITKDDNGHDSQITIDQAMQLSM------RENPPMITATTAAVVLEQK
EK-----------------EVHQDT-----DGNDTEDESETK-----------------K
PSVRKPRLKLR----VYSQKDGGVDEVATSFLDDGSLALTDEVETLEEKPNDESVYEFQ-
----------------------------DPP----TGGDTEQPSDVTMLDPTMFKKN--S
KRATDKSRDRRKIYQCRECSFYSHRHSNLVRHMKIHTDERP--YKCHLCERSFRTNTLLR
NHINTHTGVKPYKCTVDGCVMAFVTSGELTRHTRYIHTHEKPFRCTLCDYASVEISKLRR
HFRSHTGERPYSCEECGKAFADSFHLKRHRMSHT---GEKPYECPECNQRFTQRGSVKMH
IMQQHTKTAPKFKCEI--CRTLLGRKSDL-NVHMRKQHAFQ-------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>CIOIN|ENSCINP00000031196 pep:known scaffold:KH:HT000097.1:44901:51453:1 gene:ENSCING00000006765 transcript:ENSCINT00000036493 gene_biotype:protein_coding transcript_biotype:protein_coding
------------------------------------------------------------
----------------------------MADDGKDSVEVTSQIESVNGTVAPPNDSIEPE
ENEVSEKNE-EKIIEEVSNEAPAEAPV---------------------------------
--------------------EDGTTTTVQFIA--------------------------VS
ADEHARMVTAGELPESVHGADVHM---QIPGAEAQQVRLIAVDSNGVPVTESAILQAAAE
QAG-------IVFITKDDNGHDSQITIDQAMQLSM------RENPPMITATTAAVVLEQK
EK-----------------EVHQDT-----DGNDTEDESETK-----------------K
PSVRKPRLKLR----VYSQKDGGVDEVATSFLDDGSLALTDEVETLEEKPNDESVYEFQQ
RQRGTMEEWRDRECEIILKDILQTLKDEDPP----TGGDTEQPSDVTMLDPTMFKKN--S
KRATDKSRDRRKIYQCRECSFYSHRHSNLVRHMKIHTDERP--YKCHLCERSFRTNTLLR
NHINTHTGVKPYKCTVDGCVMAFVTSGELTRHTRYIHTHEKPFRCTLCDYASVEISKLRR
HFRSHTGERPYSCEECGKAFADSFHLKRHRMSHT---GEKPYECPECNQRFTQRGSVKMH
IMQQHTKTAPKFKCEI--CRTLLGRKSDL-NVHMRKQHAFQ-------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>STRPU|gi|72028083|ref|XP_797592.1| PREDICTED: uncharacterized protein LOC593001 [Strongylocentrotus purpuratus]
---------------MDENTDQPGSQTEEPVAPADQGEAEGTDAASMNVLETYLQNFNEE
LSSGPATAAGAVQQAAASTVAATEEDDTESPLAVHVEEVADAEEDVQLEEGAEGDNVAVV
KQEIGEEEEMEEEVGEASQPAPDQATIDITHTLQLLANASANISNPNALQENQEGEMGTE
NTFMQQLDTSNLVDENGAKVDPSRIAGIQTVNGEQVVMVHNMEDGTSGIGQQQVLMVAMQ
DNGQLSSMDQGVAQIAFSGAPVNMVGDNIVYQTTQ-------NTQYVPVSHNGTTQLAMT
QSGGEPGTEVYTILQTVDGAETTTITTPTTMVVSSGGVHHLGDEQTHVIATTSGDHPSYA
ELQ---------------------------PVSEDAAQQEEGALQMAAAEHEEVALIVQK
PVKRKRGRPRKDEAAKMQTQIVIVREVVEG-----------------EDGQDPSVYDFYA
GED-------------------------DTAPV--AGGDEK----------SGIEVG--G
-------AKKKTRYVVPKFDDGRLLDQVLNRAKKGGPGRRPKVHECHLCGRIFRTSTLLR
NHENTHSGTKPYKCE--LCPKAFGTSGELGRHMKYMHTHEKPHKCPLCDYLSVEASKIKR
HMRSHTGEKPYKCTLCEYASTDNYKLKRHMRVHT---GERPFNCSQCDQSFSQKSSLKEH
-EWKHVGNRPSHKCDH--CDTTFGRYADM-KTHVRKMHTAGE-PMICKICENAFTDRFTY
MQHVRGHRGEKIYKCGE-------CGYSAPQ-KRHLVIHMR------------VHTGERP
YECEECHETF-KHKQTLINHQRSKHNLIQEADGTKKRKATDEITSPSKRITRRQRMQIQE
EEETEEMVEPHTLTTADGNTIQVSMAQGGEGTVQLVQTSDGTMPVILTVGGDGQNVDEAL
QMMNGSLAAVQGHQDGEGQLMMAVPQGDGDNLHLEGQQASQQLQTSDD------------
--------------IADDSQPPELQQEGQVQEVSAPRESSSITQEQAAALQQQMVSQGII
SEGSVIAAMEEDEDGTGDGTIYLFVEEQ--------------------------------
------------------------------------------------------------
-------------------------